Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923293.1_cds_XP_016471932.1_64217
CDS Infomation

[gene=LOC107793999] [db_xref=GeneID:107793999] [protein=suppressor of mec-8 and unc-52 protein homolog 1] [protein_id=XP_016471932.1] [location=complement(join(3118..3216,4145..4196,4625..4725,5063..5170,5281..5340,5466..5592,5793..5920,6602..6697,7601..7654,7766..7852,8987..9090,9874..9957,10651..10699,11016..11168,11587..11797,12717..12748))] [gbkey=CDS]
Sequence

ATGTCTTCTACCCTCGAAATCGAAGCTCGAGATGTCATTAAGATAGTTCTTCAATTCTGC
AAGGAGAATTCTCTGCATCAAACTTTCCAGACATTGCAAAATGAGTGCCAGGTTTCTCTT
AATACTGTGGACAGCCTTGAAACCTTTATAGCCGATATTAATAGCGGAAGATGGGATGCA
GTACTACCTCAAGTTGCACAACTAAAGCTTCCGAGAAAGATACTGGAGGATTTATATGAG
CAGATTGTTTTGGAGATGATTGAACTTCGGGAGATGGATACTGCACGGGCTATTTTAAGG
CAAACCAATGTGATGGGTGTCATGAAACAGGAGCAACCAGAAAGATATTTGCGGCTCGAA
CATCTACTAGTTCGGACTTACTTTGATCCACATGAGGCTTATAATGATTCAACCAAGGAG
AAAAGACGTGCTCAAATTGCCCAAGCACTTTCCGCTGAGGTTTCTGTTGTTCCACCATCA
CGTTTAATGGCTTTGATTGGTCAAGCCTTGAAATGGCAGCAGCATCAAGGTTTACTTCCA
CCTGGAACACAATTTGATCTATTCCGAGGTACAGCTGCTATGAAACAAGATGAAGAGGAT
ATGTATCCGACAACACTCGGCCACACTATTAAGTTTGGGAAGAAGAGTCATCCAGAATGT
TCTAGGTTCTCACCTGATGGACAATTCCTTGTCTCATGTTCAGTTGATGGATTTATTGAG
GTATGGGACCACATAAGTGGAAAACTGAAGAAGGATCTTCAATATCAGGCTGATGAAACT
TTTATGATGCATGATGATGCTGTCCTTTGTGTTGATTTTAGCAGAGACTCGGAGATGCTT
GCATCTGGGTCACAAGATGGAAAAATAAAGGTTTGGCGTATAAGGACTGGTCAGTGCTTG
CGCCGTCTTGAACGCGCACATTCTCAGGGTGTCACCAGTCTTGTCTTCTCTCGAGATGGA
AGTCAGATCTTAAGCACATCCTTTGACAGCACAGCAAGAATTCATGGCCTGAAGTCAGGT
AAATTGTTAAAGGAATTTCGCGGACATTCATCTTATGTGAATGATGCCATCTTTAACAAT
GATGGATCTCGAGTCATCACGGCATCTAGTGACGGCTCAGTGAAGGTCTGGGATGCCAAA
ACTACAGAGTGTCTGCAGACATTTAGACCGCCACCTCCTTTAAGGGGTGGTGATGCATCT
GTGAATTCTGTCCATCTTTTCCCTAAGAACACAGATCACATTATAGTGTGCAATAAGACG
TCATCTATTTATTTGATGACACTTCAAGGACAGGTCGTTAAAAGTTTCTCATCTGGTAAA
AGAGAAGGTGGAGACTTTTTGGCTGCTTGTCTATCACCAAAAGGAGAATGGATTTACTGT
GTAGGTGAAGACAGAAACTTGTACTGCTTTAGTTATCAGTCAAACAAACTGGAACATCTG
ATGAAGGTACATGAAAAAGAAGTAATTGGTATCACTCACCATCCCCATATAAACCTTGTC
GCCACCTATGGAGAAGACTGCACCATGAAGTTATGGAAGCCTTGA

Peptide Sequence

PEP ID

XP_016471932.1
PEP Infomation

PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Nicotiana tabacum]
Sequence

MSSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSLETFIADINSGRWDA
VLPQVAQLKLPRKILEDLYEQIVLEMIELREMDTARAILRQTNVMGVMKQEQPERYLRLE
HLLVRTYFDPHEAYNDSTKEKRRAQIAQALSAEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDEEDMYPTTLGHTIKFGKKSHPECSRFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSQGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFNN
DGSRVITASSDGSVKVWDAKTTECLQTFRPPPPLRGGDASVNSVHLFPKNTDHIIVCNKT
SSIYLMTLQGQVVKSFSSGKREGGDFLAACLSPKGEWIYCVGEDRNLYCFSYQSNKLEHL
MKVHEKEVIGITHHPHINLVATYGEDCTMKLWKP

Transcript Sequence

Gene sequence data has not been registered.